Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833016.1_cds_XP_016505073.1_18448
CDS Infomation

[gene=LOC107823005] [db_xref=GeneID:107823005] [protein=serine carboxypeptidase-like 17] [protein_id=XP_016505073.1] [location=join(114978..115138,115303..115448,121978..122054,122323..122445,122566..122671,122782..122819,123326..123427,123539..123625,123734..123868,124751..124822,124906..125024,125394..125507,125614..125659,125753..125836)] [gbkey=CDS]
Sequence

ATGAAATTCTCAAAAATGTGTTTGTATTTTTCAAATCTGTATTACACGGTTTTGTTTTGC
TTTCTTGTTCTGGCGATCTTCCCTCAGCTTGTGGTTGCTGGTTCACCTGTCAAGTATCTT
CCTGGATTTGAAGGACCACTCCCTTTTGAACTTGAAACAGGATACATAGGAGTCGGTGAA
GCAGATGAAGTGCAGCTATACTACTACTTTGTAAAGTCGCAGTCTAATCCAAAGATTGAT
CCTCTTATTCTTTGGTTTACCGGAGGACCTGGTTGCTCTACGTTAAACGCCGTTGCACTT
GAACTCGGACCTATGATGTTTGATGATAGAGAGTATAATGGTAGCTTGCCAACACTGTCT
TCCAATCCATTTGCATACACAAAGGTGGCAAACATTATATTTGTAGATTTCCCAGTAGGG
ACTGGATTCTCGTATGCAACTACAGTAAAGTCAAATCATTCAAATAATTTACAAGCAGGT
GATCACGCTTATCAATTTCTTCGTAAGTGGCTATTAACTGAGCACCCGGAATATATCAAT
AATCCTTTCTATGTTGGTGGAGACTCATATAGTGGAATTACTCTTCCTGTTGTTACCCAA
GTGATATCATATGGGATTGATGCTGGAATCAAGCCATGGATCGATCTTAAGGGATACATA
CTTGGGAATCCAGTAACAATAATTCCTGATCAAGATAACTATAAGATCCCTTTTGCTCAT
GGGATGGGCCTTATTTCTGATGAATTATACAAGTCATTAAAGGGTAACTGTGGAGGAGAG
TACAACCATATTAATCCAAGCAACACACTCTGTTCAAAAGATATGCGTACTTTCAATTGG
TTGCTTAAAGGAATTGTTGCAGCTCATATTCTAGAGCCCAATTGTGACCAGTCGTTGTAT
GGCTCAAGAAGATCGTTGGCTCGCAAGCTCCCTCTAGAGCTTAACACTCCTGCTAAACCT
GGAGTAAAATGTCTAGGTGATTGGCTACATCTCTCTGAGATTTGGGCTAATGATGAGAAT
GTGAGAGAGGCTCTTCATGTTCGAAAGGGGACAATTGGAGCTTGGGAAAAATGCAGGAGT
AACTTGCCTTTTACAATGAATGTGAACAACACTATATCATATCATGCATATCTTAGCACT
AAAGGCTTGAAATCTCTTATTTACAGTGGTGACCATGACATGATAACTCCATTTATATCA
ACGCAAGCATGGATTAAATCACTAAATTACTCCATTGTTGACGATTGGAGGCCATGGATT
GTTAATGGTCAAGTTGCAGGATATACAAGAAGTTTTTCCAACCAAATGACATTTGCGACA
TTGAAGGGAGCAGGACATACTGCGCCAAATTGGGCTCCAGCGGAATGTCTTGCCATGCTA
AAGAGATGGTTATCAAATAAACCACTCTAG

Peptide Sequence

PEP ID

XP_016505073.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 17 [Nicotiana tabacum]
Sequence

MKFSKMCLYFSNLYYTVLFCFLVLAIFPQLVVAGSPVKYLPGFEGPLPFELETGYIGVGE
ADEVQLYYYFVKSQSNPKIDPLILWFTGGPGCSTLNAVALELGPMMFDDREYNGSLPTLS
SNPFAYTKVANIIFVDFPVGTGFSYATTVKSNHSNNLQAGDHAYQFLRKWLLTEHPEYIN
NPFYVGGDSYSGITLPVVTQVISYGIDAGIKPWIDLKGYILGNPVTIIPDQDNYKIPFAH
GMGLISDELYKSLKGNCGGEYNHINPSNTLCSKDMRTFNWLLKGIVAAHILEPNCDQSLY
GSRRSLARKLPLELNTPAKPGVKCLGDWLHLSEIWANDENVREALHVRKGTIGAWEKCRS
NLPFTMNVNNTISYHAYLSTKGLKSLIYSGDHDMITPFISTQAWIKSLNYSIVDDWRPWI
VNGQVAGYTRSFSNQMTFATLKGAGHTAPNWAPAECLAMLKRWLSNKPL

Transcript Sequence

Gene sequence data has not been registered.